
Biodiesel fuel tanks require regular cleaning to ensure reliable performance. Biodiesel fuels are susceptible to poor cold-weather performance, high water content, and microbial infestation, which can lead to issues such as sludge, slime, or algae buildup. To clean a biodiesel fuel tank, it is essential to first drain the tank and remove any excess water and contaminants. This can be achieved through methods such as siphoning, pumping, or draining. Subsequently, cleaning products specifically designed for biodiesel fuel tanks, such as Clear-Diesel Fuel & Tank Cleaner, can be added to remove water, disperse contaminants, and stabilize the fuel for long-term storage. Additionally, products like Bio Kleen Diesel Fuel Biocide can be used to effectively kill microbes. For more severe cases of contamination, taking the tank out and cleaning it with hot water, steam, and heavy detergent may be necessary.
Characteristics and Values for Cleaning a Biodiesel Fuel Tank
| Characteristics | Values |
|---|---|
| Cleaning products | Clear-Diesel Fuel & Tank Cleaner, Bio Kleen Diesel Fuel Biocide, Gasline deicer, Hot water/steam and heavy detergent |
| Cleaning methods | Siphoning, Pumping or draining excess water and fuel, Removing tank, Spraying with a garden sprayer, Cleaning with old fuel |
| Reasons for cleaning | Poor cold weather performance, High water content, Microbial infestation, Slime, Rust, Algae, Bacteria, Water in the water separator |
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What You'll Learn

Use a diesel fuel biocide to kill microbes
Biodiesel fuels are susceptible to microbial infestations, which can lead to operational issues. To address this, a diesel fuel biocide can be used to kill microbes in the fuel system.
Diesel fuel biocides are effective in both diesel fuel and water, killing microbes such as bacteria and fungi. They are designed to address microbial contamination, which can cause mucous-like accumulations on fuel filters, increased fuel filter replacement, and potential damage to the fuel system.
To use a diesel fuel biocide effectively, it is recommended to add it to the fuel in the tank and then fill the tank with more fuel to achieve the recommended concentration of the biocide. This ensures that the biocide is evenly distributed and able to reach all areas where microbes may be present. Additionally, using a biomass dispersant chemical alongside the biocide can help break up biomass formations, improving the biocide's ability to penetrate and kill microbes.
It is important to note that simply adding biocide to the fuel without proper circulation may be less effective. Proper circulation ensures that the biocide is thoroughly blended and reaches all areas where microbes may be present. Additionally, it is important to be mindful that killed microbes may settle at the bottom of the tank and plug fuel filters, requiring more frequent filter changes.
Diesel fuel biocides are an effective way to address microbial contamination in biodiesel fuel tanks. By following the recommended usage instructions and considering additional steps such as using biomass dispersants and ensuring proper circulation, users can effectively kill microbes and maintain the performance of their biodiesel fuel systems.
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Drain and rinse the tank
To effectively drain and rinse your biodiesel fuel tank, follow these comprehensive steps:
Firstly, completely drain the tank of its contents. This can be done by pumping or siphoning out the excess fuel and contaminants. It is important to do this carefully and ensure that you collect the drained fuel in a safe container.
After draining, inspect the inside of the tank using a flashlight or a mirror. This initial inspection will help you identify any problem areas, such as a build-up of gunk, sediment, or corrosion.
The next step is to thoroughly rinse the tank. One effective method is to fill the tank with water and leave it in direct sunlight for several days. The heat from the sun will help loosen any remaining contaminants. Roll or rotate the tank to ensure that the water reaches all interior surfaces.
During the rinsing process, you may need to repeat the filling and draining steps multiple times until the water runs clear and all contaminants are removed. You may also wish to use a cleaning solvent or detergent to assist in breaking down the diesel residue.
Finally, allow the tank to air dry completely before refilling it with fuel. This process may take several days, and you can use a garden sprayer or a similar tool to accelerate the rinsing and drying process.
Remember, safety should be a top priority when handling fuel and cleaning solvents. Ensure adequate ventilation and wear appropriate protective gear, including gloves and eye protection.
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$44.95

Use a solvent to cut the diesel
When it comes to cleaning a biodiesel fuel tank, one method is to use a solvent to cut through the diesel. This process can help remove water, slime, and contaminants, as well as stabilize the fuel for long-term storage. Here's a step-by-step guide on using a solvent to cut the diesel and clean your biodiesel fuel tank:
Choose the Right Solvent
Select a suitable solvent that can effectively cut through the diesel and remove any built-up contaminants. Commercial cleaning solvents are available from industrial supply houses and auto supply stores. These solvents are designed specifically for parts cleaning and can handle heavy grease and grime. Some common options include Agitene, which comes in an aggressive version that requires gloves, and a milder version that is skin-friendly.
Prepare the Work Area
Before beginning the cleaning process, ensure you have a well-ventilated work area to minimize the impact of solvent fumes. Put on appropriate personal protective equipment, including gloves and eye protection, to safeguard yourself from the chemicals. It is also recommended to have a fire extinguisher nearby as a safety precaution when working with flammable liquids.
Drain Excess Water and Contaminants
If possible, start by draining or pumping out excess water and fuel contaminants from the bottom of the fuel tank. Continue this process until you notice diesel fuel appearing, indicating that most of the water and contaminants have been removed.
Add the Solvent
Now, carefully add the chosen solvent to the fuel tank. Refer to the manufacturer's instructions for the appropriate ratio of solvent to diesel fuel. For example, some products recommend adding 16 ounces of solvent for every 20 gallons of diesel fuel to effectively clean and maintain your fuel tank.
Agitate and Soak
Once the solvent has been added, gently agitate the mixture to ensure it thoroughly coats the interior of the fuel tank and comes into contact with all surfaces. Allow the solvent to soak for a recommended period, giving it time to break down and dissolve any remaining water, slime, or contaminants.
Rinse and Refill
After the soaking period, thoroughly rinse the fuel tank with clean diesel fuel to flush out any remaining solvent residue, contaminants, or debris. Finally, refill the fuel tank with fresh diesel fuel, ensuring that your tank is now clean and ready for use or long-term storage.
Using a solvent to cut the diesel is an effective method for cleaning biodiesel fuel tanks, ensuring the removal of contaminants and stabilization of the fuel. Always follow safety precautions and product instructions when working with solvents and fuels to ensure a successful and safe cleaning experience.
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Add gasline deicer to kill bacteria
Biodiesel fuels often require treatment to ensure reliable performance due to issues with poor cold weather performance, high water content, and microbial infestation. Microbial contamination of diesel-biodiesel blends in storage tanks is a common problem, with bacteria, fungi, and yeast being found in diesel fuel and biodiesel. This contamination can lead to fuel starvation, engine problems, and potential damage to fuel injection equipment.
To effectively clean a biodiesel fuel tank, it is essential to address the microbial infestation. One recommended method is to use a fuel biocide to disinfect the tank and eradicate the microbes. Products such as Clear-Diesel Fuel & Tank Cleaner and Bio Kleen Diesel Fuel Biocide Treatment are designed to remove water, disperse contaminants, and stabilize fuel during long-term storage. These treatments are added to the fuel and can effectively control microbial growth in diesel oil, fuel oil, gasoline, or kerosene.
However, it's important to note that simply removing the water will not be sufficient to eliminate the microbial infestation. Microbes can persist in the fuel tank and reside within the biofilms they produce, waiting for water to become available again. Therefore, a comprehensive approach is necessary, combining water removal with the use of a fuel biocide to ensure the effective cleaning of a biodiesel fuel tank.
One way to address microbial infestation in a biodiesel fuel tank is by adding a gasline deicer. While this may seem counterintuitive, the deicer can effectively lower the freezing point of the fuel, preventing the formation of ice and helping to kill bacteria. Gasline deicers are designed to prevent fuel line freezing and can also aid in water removal, which is crucial for addressing microbial contamination.
When choosing a gasline deicer, opt for a product specifically designed for diesel and biodiesel fuels. These products will have additives that can help improve the cold-weather performance of the fuel while also addressing any microbial issues. Always follow the instructions on the product label, including the recommended dosage and application guidelines, to ensure safe and effective use.
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Use a fuel polishing formula to remove water
Biodiesel fuel tanks require regular cleaning to ensure reliable performance. Water has always been a problem in diesel fuel. Today's cleaner-burning fuels have lower sulfur content and are more prone to water separation, contamination, and instability. This is where fuel polishing formulas come into play.
The Fuel Polishing Formula of Clear-Diesel Fuel & Tank Cleaner is an advanced diesel fuel and tank-cleaning technology that removes water and slime, disperses contaminants, and stabilizes fuel during long-term storage. It can be used as a preventive maintenance measure or for immediate clean-up of equipment or fuel storage tanks. The product is effective in all diesel fuels, including Ultra Low Sulfur Diesel (ULSD) and biodiesel blends. It is safe and recommended to be used at least quarterly or as needed.
To use Clear-Diesel Fuel & Tank Cleaner, first, drain excess water and fuel contaminants from the bottom of the fuel tank until diesel fuel appears. Then, add the entire contents (16 ounces) of Clear-Diesel Fuel & Tank Cleaner to each 20 gallons of diesel fuel. Finally, fill the tank with diesel fuel. This product is to be added to the fuel and not to the diesel exhaust fluid tank.
In addition to using fuel polishing formulas, it is important to implement regular tank checks and maintenance to remove water and prevent bio-issues and tank bottom corrosion. Fuel polishing is especially important for diesel fuel in emergency generator tanks, as this fuel is stored for long periods, sometimes up to 10 years, before it is consumed.
For large-scale operations or facilities that store large quantities of fuel, fuel polishing equipment or systems can be employed. These systems automatically operate on a programmed schedule and feature multiple stages of filtration to effectively remove water and other contaminants from the fuel.
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Frequently asked questions
Biodiesel is a blend of diesel fuel and biodiesel, with varying percentages of biodiesel depending on the mandate of the state. The U.S. government has authorized B20 fuel, which is 20% biodiesel and 80% diesel fuel, for non-strategic applications.
To clean your biodiesel fuel tank, you can use a diesel fuel biocide like Clear-Diesel Fuel & Tank Cleaner. This product removes water and slime, disperses contaminants, and stabilizes fuel during long-term storage. First, pump or drain excess water and fuel contaminants from the bottom of the fuel tank until diesel fuel appears. Then, add 16 ounces of Clear-Diesel Fuel & Tank Cleaner to each 20 gallons of diesel fuel.
If your tractor's fuel quit flowing out of the tank, this may be a sign that your tank needs cleaning. Other signs include rust, slime, or algae buildup, which can result from fuel stored in a translucent container in sunlight.
In addition to Clear-Diesel Fuel & Tank Cleaner, you can use Bio Kleen Diesel Fuel Biocide to kill microbes in the fuel. You can also try a gasline deicer, which is an alcohol-based product that will kill bacteria and break up masses in the fuel.
To prevent contamination, it is important to store biodiesel fuel in an opaque container out of direct sunlight. Additionally, ensure that the fuel is treated for reliable performance, especially in cold weather, and store it for no more than 90 days to prevent deterioration.











































